STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03810.1Putative aldouronate transport system permease protein. (303 aa)    
Predicted Functional Partners:
SDS03856.1
Putative aldouronate transport system permease protein.
 
 
  0.965
SDS03765.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.957
SDS60138.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.869
SDS44009.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
  0.865
SDS85382.1
Putative aldouronate transport system substrate-binding protein.
  
  0.865
SDS46598.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  0.864
SDS73691.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
  0.863
SDR96171.1
Multiple sugar transport system permease protein/putative aldouronate transport system permease protein.
  
 
  0.861
SDS03270.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 
  0.861
SDS22810.1
Putative aldouronate transport system permease protein.
  
 
  0.861
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.