STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS04870.1ATP-binding cassette, subfamily B. (740 aa)    
Predicted Functional Partners:
SDS04826.1
ATP-binding cassette, subfamily B.
 
 
 
0.867
SDT15039.1
Polar amino acid transport system ATP-binding protein.
 
     
0.840
SDT51611.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
   
 
0.794
SDS04922.1
Transcriptional regulator, MarR family.
 
     0.770
SDS97259.1
Putative ABC transport system ATP-binding protein.
 
     
0.738
pstB-2
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.723
SDT19861.1
ATP-binding cassette, subfamily B.
 
 
 
0.593
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.537
SDT53165.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.492
SDS93351.1
ATP-binding cassette, subfamily B, AbcA/BmrA.
  
 
 
0.478
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.