STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS08668.1Sporulation lipoprotein, YhcN/YlaJ family. (361 aa)    
Predicted Functional Partners:
SDT01116.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
  
     0.658
SDT37380.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
   
 0.628
SDT37494.1
Prespore-specific regulator.
  
     0.576
SDS28448.1
ABC-2 type transport system permease protein.
  
     0.539
SDT11176.1
Glycosyl transferases group 1.
 
     0.521
SDS08738.1
Beta-galactosidase.
       0.510
SDS13889.1
Copper transport protein.
  
     0.501
SDS53277.1
Spore germination protein D.
  
     0.497
fosB
Metallothiol transferase; Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor. Belongs to the fosfomycin resistance protein family. FosB subfamily.
  
     0.496
SDR97919.1
Uncharacterized membrane protein YesL.
  
     0.492
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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