STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS11678.1Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)    
Predicted Functional Partners:
SDS30372.1
Glutamate synthase (ferredoxin).
    
  0.890
SDS11795.1
Chemotaxis protein CheX.
       0.785
SDS11650.1
Superfamily II DNA and RNA helicase.
 
     0.775
SDS11752.1
Hypothetical protein.
       0.773
SDS11565.1
ABC-2 type transport system permease protein.
 
     0.737
SDS11613.1
ABC-2 type transport system ATP-binding protein.
 
     0.735
SDT50173.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.679
SDT35997.1
Cytochrome P450.
  
 0.659
SDT51946.1
Glucose 1-dehydrogenase/3-oxoacyl-[acyl-carrier protein] reductase/2-deoxy-D-gluconate 3-dehydrogenase.
 
 
0.651
SDT19309.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
0.589
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.