STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS14497.1ABC-2 type transport system ATP-binding protein. (283 aa)    
Predicted Functional Partners:
SDS14418.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
    0.859
SDS14459.1
Hypothetical protein.
       0.838
SDS14347.1
ABC-type multidrug transport system, ATPase component.
 
    
0.834
SDS14385.1
Hypothetical protein.
       0.758
SDS18145.1
Bacitracin transport system ATP-binding protein.
 
  
  0.707
SDT20376.1
Putative ABC transport system ATP-binding protein/putative ABC transport system ATP-binding protein.
 
  
  0.699
SDT11026.1
Putative ABC transport system ATP-binding protein.
 
  
  0.692
SDS73457.1
ABC-2 type transport system ATP-binding protein.
  
     0.669
SDT54685.1
Phosphonate transport system ATP-binding protein.
  
     0.555
SDT56519.1
ABC-2 type transport system permease protein.
  
 
 0.548
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.