STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS19286.1S-layer homology domain-containing protein. (4762 aa)    
Predicted Functional Partners:
SDT39728.1
Ankyrin repeat.
  
  
  0.808
SDS97962.1
S-layer homology domain-containing protein; Manually curated.
  
     0.774
SDS43086.1
Copper amine oxidase N-terminal domain-containing protein.
  
  
  0.772
SDT32323.1
Copper amine oxidase N-terminal domain-containing protein.
  
  
  0.771
SDS21022.1
S-layer homology domain-containing protein.
  
     0.770
SDS59555.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.770
SDT39892.1
Ankyrin repeat.
  
    0.768
SDT54263.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.765
SDS97828.1
Polysaccharide pyruvyl transferase CsaB.
  
     0.764
SDT19718.1
N-acetylmuramoyl-L-alanine amidase.
  
    0.764
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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