STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS22810.1Putative aldouronate transport system permease protein. (322 aa)    
Predicted Functional Partners:
SDS22857.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
  0.963
SDS22901.1
Putative aldouronate transport system substrate-binding protein.
 
  
  0.928
SDS03810.1
Putative aldouronate transport system permease protein.
  
 
  0.861
SDS38158.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.861
SDS43974.1
Putative aldouronate transport system permease protein.
  
 
  0.861
SDS46645.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.861
SDS85490.1
Putative aldouronate transport system permease protein.
  
 
  0.861
SDS86202.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.861
SDT32774.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.861
SDT51483.1
Putative aldouronate transport system permease protein.
  
 
  0.861
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.