STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS24347.1Nucleotidyltransferase-like. (295 aa)    
Predicted Functional Partners:
SDS24410.1
Zinc-ribbon containing domain-containing protein.
 
     0.812
SDS52489.1
Transmembrane transcriptional regulator (anti-sigma factor RsiW).
  
     0.716
SDS82346.1
Uncharacterized conserved protein YybS, DUF2232 family.
  
     0.693
SDR88033.1
Protein of unknown function.
  
     0.690
SDT22759.1
YugN-like family protein.
  
     0.688
SDT46021.1
Flagellar protein FliO/FliZ.
  
     0.688
SDT15997.1
Uncharacterized protein YfkK, UPF0435 family.
  
     0.677
SDS71873.1
YwhD family protein.
  
     0.644
SDR85426.1
c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains.
  
     0.641
SDR85811.1
Hypothetical protein.
  
     0.632
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.