STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS30177.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (316 aa)    
Predicted Functional Partners:
SDS30141.1
Putative aldouronate transport system permease protein.
 
 
  0.964
SDS30094.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 
  0.939
SDT52632.1
Putative aldouronate transport system permease protein.
  
 
  0.904
SDS38158.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.903
SDS46645.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.901
SDS85490.1
Putative aldouronate transport system permease protein.
  
 
  0.901
SDS92076.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.901
SDT32774.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.900
SDS03209.1
Putative aldouronate transport system permease protein.
  
 
  0.899
SDT16755.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.899
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.