STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS32107.1HEAT repeat-containing protein. (386 aa)    
Predicted Functional Partners:
SDS22459.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
  
  0.768
SDS50844.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
  
  0.752
SDR84789.1
Hypothetical protein.
  
     0.744
SDR77712.1
Dynamin family protein.
 
     0.740
SDT37467.1
Protein of unknown function.
  
     0.738
SDS53226.1
KinB signaling pathway activation protein.
  
     0.734
SDT20725.1
Putative membrane protein.
  
     0.733
SDS71873.1
YwhD family protein.
  
     0.732
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.729
SDS19565.1
Protein of unknown function.
  
     0.719
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.