STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS38110.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (321 aa)    
Predicted Functional Partners:
SDS38158.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
  0.977
SDS38208.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 
  0.923
SDT52632.1
Putative aldouronate transport system permease protein.
  
 
  0.904
SDS46645.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.901
SDS85490.1
Putative aldouronate transport system permease protein.
  
 
  0.901
SDS92076.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.901
SDS03209.1
Putative aldouronate transport system permease protein.
  
 
  0.899
SDT16755.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.899
SDT32774.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
  0.899
SDT04672.1
Putative aldouronate transport system permease protein.
  
 
  0.897
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.