STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS38527.1ABC-2 type transport system ATP-binding protein. (301 aa)    
Predicted Functional Partners:
SDS38491.1
ABC-2 type transport system permease protein.
 
 0.980
SDS66264.1
ABC-2 type transport system permease protein.
 
 0.920
SDS38572.1
ABC-2 type transport system ATP-binding protein.
 
    
0.804
SDS97259.1
Putative ABC transport system ATP-binding protein.
 
    
0.744
SDS38433.1
Hypothetical protein.
       0.732
SDS38609.1
GntR family transcriptional regulator.
  
    0.690
SDS70395.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.641
SDS38674.1
Hypothetical protein.
       0.628
SDS66570.1
ABC-2 type transport system permease protein.
  
 
 0.531
SDS38860.1
Putative membrane protein.
       0.506
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.