STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS44880.1Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN. (128 aa)    
Predicted Functional Partners:
SDS44573.1
Ethanolamine utilization protein EutN.
 
 
 0.989
SDS44537.1
Ethanolamine utilization protein EutS.
 
  
 0.919
SDS44468.1
Ethanolamine utilization protein EutP; Belongs to the EutP/PduV family.
 
  
 0.911
SDS44925.1
Ethanolamine utilization protein EutL.
 
  
 0.867
SDS44813.1
Acetaldehyde dehydrogenase.
 
  
 0.859
SDS44655.1
Putative phosphotransacetylase.
 
     0.812
SDS44987.1
Putative Mg2+ transporter-C (MgtC) family protein.
       0.697
SDS45043.1
Histidinol-phosphatase (PHP family); Belongs to the PHP hydrolase family. HisK subfamily.
       0.697
SDS45083.1
Transcriptional regulator, DeoR family.
       0.697
SDS44731.1
Ethanolamine utilization protein EutM.
 
   
0.659
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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