STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS46163.1Putative chitobiose transport system substrate-binding protein. (481 aa)    
Predicted Functional Partners:
SDS46047.1
Putative chitobiose transport system permease protein.
 
  0.992
SDS46109.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.992
SDS50712.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.886
SDS50758.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.795
SDS65698.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.774
SDS37791.1
Multiple sugar transport system substrate-binding protein.
  
  
  0.768
SDT23708.1
Multiple sugar transport system permease protein.
  
  0.763
SDS65721.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.757
SDS04591.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.737
SDT23679.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.734
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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