STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS47552.1Endoglucanase Acf2. (1009 aa)    
Predicted Functional Partners:
SDT06692.1
Conserved repeat domain-containing protein.
  
     0.686
SDS30011.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.665
SDR80540.1
Chitinase.
  
     0.660
SDS74621.1
Cellulose binding domain-containing protein.
  
     0.650
SDS09241.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.635
SDS09185.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.634
SDT13835.1
Conserved repeat domain-containing protein.
  
     0.627
SDS04433.1
BNR repeat-like domain-containing protein.
  
     0.602
SDT06665.1
Conserved repeat domain-containing protein.
  
     0.598
SDS09132.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.597
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.