STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS61200.1Oligopeptide transport system substrate-binding protein. (572 aa)    
Predicted Functional Partners:
SDS61145.1
Oligopeptide transport system permease protein.
 
 0.996
SDS61102.1
Oligopeptide transport system permease protein.
 
 0.994
SDS35824.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.975
SDS61016.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.968
SDS61060.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.967
SDT17066.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
 
 0.944
SDS35907.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.943
SDT17026.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
 
 0.940
SDS35739.1
Peptide/nickel transport system permease protein.
 
 0.929
SDT16963.1
Peptide/nickel transport system permease protein.
 
 0.915
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.