STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS66804.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (230 aa)    
Predicted Functional Partners:
SDT52930.1
GAF sensor hybrid histidine kinase.
  
0.977
SDS66766.1
Signal transduction histidine kinase.
  0.972
SDT13954.1
PAS domain S-box-containing protein.
 0.878
SDT47806.1
Signal transduction histidine kinase.
  0.874
SDS82734.1
PAS/PAC sensor signal transduction histidine kinase.
 
  0.848
SDT56411.1
Predicted ATPase.
  
 0.839
SDS17820.1
Signal transduction histidine kinase.
  
  0.837
SDT02054.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.836
SDS97386.1
Signal transduction histidine kinase.
 0.824
SDS04027.1
Signal transduction histidine kinase.
 
  0.800
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.