STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS75045.1Glucose/arabinose dehydrogenase, beta-propeller fold. (409 aa)    
Predicted Functional Partners:
SDS95783.1
RHS repeat-associated core domain-containing protein.
 
  
 0.860
SDS48338.1
Glyoxalase family protein.
    
  0.724
SDS75005.1
DNA-binding transcriptional regulator, MarR family.
    
  0.590
SDS74940.1
PhnB protein.
    
  0.560
SDT25104.1
Catechol 2,3-dioxygenase.
  
  
  0.556
SDS49047.1
Hypothetical protein.
  
  
  0.523
SDT56489.1
Glyoxylase, beta-lactamase superfamily II.
  
 
  0.517
SDS64539.1
Catechol-2,3-dioxygenase.
 
  
  0.503
SDS02613.1
Ig-like domain (group 2).
    
 0.491
SDS02659.1
Ig-like domain (group 2).
    
 0.491
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.