STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS85773.1Beta-propeller repeat-containing protein. (948 aa)    
Predicted Functional Partners:
SDS95783.1
RHS repeat-associated core domain-containing protein.
 
 0.782
SDS85857.1
Beta-propeller repeat-containing protein.
 
    
0.644
SDS85820.1
Beta-propeller repeat-containing protein.
 
    
0.629
SDS92355.1
BclB C-terminal domain-containing protein.
 
     0.565
SDS85935.1
Tetratricopeptide repeat-containing protein.
 
     0.561
SDS85736.1
Beta-propeller repeat-containing protein.
 
    
0.536
SDT00231.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
  0.444
SDS17638.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.439
SDS62431.1
Hypothetical protein.
   
  0.439
SDT00346.1
Hypothetical protein.
   
  0.439
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.