STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS88007.1Major Facilitator Superfamily protein. (459 aa)    
Predicted Functional Partners:
SDS63653.1
Major Facilitator Superfamily protein.
  
     0.629
SDS87710.1
MFS transporter, DHA3 family, macrolide efflux protein.
  
     0.548
SDS46991.1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
  
  
  0.524
SDS08480.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.480
SDT50749.1
Transmembrane secretion effector.
  
     0.480
SDR93258.1
Predicted arabinose efflux permease, MFS family.
  
     0.476
SDS88045.1
Protein-tyrosine phosphatase.
       0.452
SDT52837.1
Adenosylhomocysteine nucleosidase.
  
     0.452
SDS08668.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
     0.447
SDS97216.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.426
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.