STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT11026.1Putative ABC transport system ATP-binding protein. (256 aa)    
Predicted Functional Partners:
SDT50423.1
ABC-type transport system, involved in lipoprotein release, permease component.
  
 0.986
SDT11079.1
Putative ABC transport system permease protein.
 0.983
SDS18093.1
Bacitracin transport system permease protein.
 0.977
SDS97296.1
Putative ABC transport system permease protein.
 
  0.975
SDT20404.1
Putative ABC transport system permease protein.
 0.928
SDT05949.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
  0.816
SDT27863.1
Heme ABC exporter, ATP-binding protein CcmA.
 
 
 
0.791
SDT10792.1
HlyD family secretion protein.
 
 0.789
SDT10886.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.774
ddl-2
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.773
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.