STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT13204.1DNA-binding transcriptional regulator, MarR family. (218 aa)    
Predicted Functional Partners:
SDT13247.1
Putative drug exporter of the RND superfamily.
 
    0.877
SDT41614.1
PTS system, D-glucosamine-specific IIC component.
     
 0.828
SDS93853.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
     
 0.649
SDT13166.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
       0.570
SDT13272.1
Aldose 1-epimerase.
 
  
  0.558
SDS08154.1
SWIM zinc finger.
  
     0.474
SDT13303.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
    
  0.422
SDT13137.1
Hypothetical protein.
       0.404
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.