STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT16236.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
SDT02054.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
  
 0.802
SDS98936.1
Flagellar protein FliS.
  
  
 0.728
SDS98904.1
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.717
SDT16183.1
HD domain-containing protein.
       0.658
flgK
Flagellar hook-associated protein 1 FlgK.
  
  
 0.613
SDS58325.1
Chemotaxis protein MotB.
  
 
 0.594
SDS76008.1
Chemotaxis protein MotB.
  
 
 0.594
SDS98558.1
FlgN protein.
  
  
 0.587
SDS58304.1
Chemotaxis protein MotA.
  
   0.566
SDS75966.1
Chemotaxis protein MotA.
  
   0.566
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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