STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT18957.1Manganese/zinc/iron transport system permease protein. (294 aa)    
Predicted Functional Partners:
SDT18855.1
Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
SDT18893.1
Manganese/zinc/iron transport system ATP-binding protein.
 0.999
SDT18924.1
Manganese/zinc/iron transport system permease protein.
 
  
 
0.990
SDT56781.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.975
SDT56812.1
Zinc transport system ATP-binding protein.
 0.975
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.779
SDT56796.1
Zinc transport system permease protein.
  
  
 
0.696
mntR
Iron (metal) dependent repressor, DtxR family; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
  
 
 0.625
SDS81071.1
S4 domain protein YaaA.
  
    0.489
SDS05947.1
Iron complex transport system ATP-binding protein.
   
 0.464
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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