STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT19022.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
SDT18992.1
Hypothetical protein.
 
     0.822
SDT19059.1
Trehalose utilization protein.
       0.592
SDT19086.1
Stage V sporulation protein B.
       0.575
SDT19192.1
Thioredoxin.
       0.512
SDS73145.1
Ribosomal protein S18 acetylase RimI.
  
     0.495
SDT18893.1
Manganese/zinc/iron transport system ATP-binding protein.
       0.443
SDT18855.1
Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.416
SDT18924.1
Manganese/zinc/iron transport system permease protein.
       0.416
SDT18957.1
Manganese/zinc/iron transport system permease protein.
       0.416
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.