Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR98678.1 | SDT19218.1 | SAMN05444162_0490 | SAMN05444162_3369 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Cytochrome c oxidase assembly protein subunit 15. | 0.473 |
SDR98678.1 | SDT20690.1 | SAMN05444162_0490 | SAMN05444162_3414 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Chlorite dismutase. | 0.944 |
SDR98678.1 | hemH | SAMN05444162_0490 | SAMN05444162_0491 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.999 |
SDS38860.1 | SDS71873.1 | SAMN05444162_1369 | SAMN05444162_2110 | Putative membrane protein. | YwhD family protein. | 0.444 |
SDS38860.1 | SDT19218.1 | SAMN05444162_1369 | SAMN05444162_3369 | Putative membrane protein. | Cytochrome c oxidase assembly protein subunit 15. | 0.730 |
SDS38860.1 | SDT20690.1 | SAMN05444162_1369 | SAMN05444162_3414 | Putative membrane protein. | Chlorite dismutase. | 0.658 |
SDS56949.1 | SDT20690.1 | SAMN05444162_1764 | SAMN05444162_3414 | Heme-degrading monooxygenase HmoA. | Chlorite dismutase. | 0.911 |
SDS56949.1 | hemH | SAMN05444162_1764 | SAMN05444162_0491 | Heme-degrading monooxygenase HmoA. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.908 |
SDS57450.1 | SDS71873.1 | SAMN05444162_1777 | SAMN05444162_2110 | Putative glycerol-1-phosphate prenyltransferase. | YwhD family protein. | 0.611 |
SDS57450.1 | SDT20690.1 | SAMN05444162_1777 | SAMN05444162_3414 | Putative glycerol-1-phosphate prenyltransferase. | Chlorite dismutase. | 0.471 |
SDS57450.1 | SDT47599.1 | SAMN05444162_1777 | SAMN05444162_4471 | Putative glycerol-1-phosphate prenyltransferase. | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.642 |
SDS71873.1 | SDS38860.1 | SAMN05444162_2110 | SAMN05444162_1369 | YwhD family protein. | Putative membrane protein. | 0.444 |
SDS71873.1 | SDS57450.1 | SAMN05444162_2110 | SAMN05444162_1777 | YwhD family protein. | Putative glycerol-1-phosphate prenyltransferase. | 0.611 |
SDS71873.1 | SDS94454.1 | SAMN05444162_2110 | SAMN05444162_2665 | YwhD family protein. | Membrane protein CcdC involved in cytochrome C biogenesis. | 0.633 |
SDS71873.1 | SDT20690.1 | SAMN05444162_2110 | SAMN05444162_3414 | YwhD family protein. | Chlorite dismutase. | 0.600 |
SDS71873.1 | SDT20725.1 | SAMN05444162_2110 | SAMN05444162_3415 | YwhD family protein. | Putative membrane protein. | 0.652 |
SDS71873.1 | SDT47599.1 | SAMN05444162_2110 | SAMN05444162_4471 | YwhD family protein. | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.774 |
SDS94454.1 | SDS71873.1 | SAMN05444162_2665 | SAMN05444162_2110 | Membrane protein CcdC involved in cytochrome C biogenesis. | YwhD family protein. | 0.633 |
SDS94454.1 | SDT20690.1 | SAMN05444162_2665 | SAMN05444162_3414 | Membrane protein CcdC involved in cytochrome C biogenesis. | Chlorite dismutase. | 0.549 |
SDT19218.1 | SDR98678.1 | SAMN05444162_3369 | SAMN05444162_0490 | Cytochrome c oxidase assembly protein subunit 15. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.473 |
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