Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR79212.1 | SDS20601.1 | SAMN05444162_0048 | SAMN05444162_0959 | DNA replication protein. | Uncharacterized protein YutD. | 0.595 |
| SDR79212.1 | SDS81134.1 | SAMN05444162_0048 | SAMN05444162_2341 | DNA replication protein. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.477 |
| SDR79212.1 | SDS98411.1 | SAMN05444162_0048 | SAMN05444162_2767 | DNA replication protein. | Competence protein ComFA. | 0.632 |
| SDR79212.1 | SDT20759.1 | SAMN05444162_0048 | SAMN05444162_3416 | DNA replication protein. | Replicative DNA helicase loader DnaB. | 0.415 |
| SDR79212.1 | SDT20784.1 | SAMN05444162_0048 | SAMN05444162_3417 | DNA replication protein. | Primosomal protein DnaI. | 0.842 |
| SDR79212.1 | SDT33846.1 | SAMN05444162_0048 | SAMN05444162_3881 | DNA replication protein. | Hypothetical protein. | 0.604 |
| SDS20601.1 | SDR79212.1 | SAMN05444162_0959 | SAMN05444162_0048 | Uncharacterized protein YutD. | DNA replication protein. | 0.595 |
| SDS20601.1 | SDS98411.1 | SAMN05444162_0959 | SAMN05444162_2767 | Uncharacterized protein YutD. | Competence protein ComFA. | 0.714 |
| SDS20601.1 | SDT20759.1 | SAMN05444162_0959 | SAMN05444162_3416 | Uncharacterized protein YutD. | Replicative DNA helicase loader DnaB. | 0.555 |
| SDS20601.1 | SDT20784.1 | SAMN05444162_0959 | SAMN05444162_3417 | Uncharacterized protein YutD. | Primosomal protein DnaI. | 0.703 |
| SDS20601.1 | SDT33846.1 | SAMN05444162_0959 | SAMN05444162_3881 | Uncharacterized protein YutD. | Hypothetical protein. | 0.622 |
| SDS20601.1 | SDT42361.1 | SAMN05444162_0959 | SAMN05444162_4230 | Uncharacterized protein YutD. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.670 |
| SDS81134.1 | SDR79212.1 | SAMN05444162_2341 | SAMN05444162_0048 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA replication protein. | 0.477 |
| SDS81134.1 | SDS82498.1 | SAMN05444162_2341 | SAMN05444162_2371 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.456 |
| SDS81134.1 | SDT20784.1 | SAMN05444162_2341 | SAMN05444162_3417 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Primosomal protein DnaI. | 0.610 |
| SDS82498.1 | SDS81134.1 | SAMN05444162_2371 | SAMN05444162_2341 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.456 |
| SDS82498.1 | SDT20784.1 | SAMN05444162_2371 | SAMN05444162_3417 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Primosomal protein DnaI. | 0.933 |
| SDS98411.1 | SDR79212.1 | SAMN05444162_2767 | SAMN05444162_0048 | Competence protein ComFA. | DNA replication protein. | 0.632 |
| SDS98411.1 | SDS20601.1 | SAMN05444162_2767 | SAMN05444162_0959 | Competence protein ComFA. | Uncharacterized protein YutD. | 0.714 |
| SDS98411.1 | SDT20784.1 | SAMN05444162_2767 | SAMN05444162_3417 | Competence protein ComFA. | Primosomal protein DnaI. | 0.736 |
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