STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT32402.1HAMP domain-containing protein. (386 aa)    
Predicted Functional Partners:
SDT52930.1
GAF sensor hybrid histidine kinase.
  
0.974
SDT32369.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.972
SDR92562.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
 
  
  0.903
SDT13954.1
PAS domain S-box-containing protein.
 
0.896
SDT02054.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.870
SDT53330.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.868
SDT34495.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.866
SDT56411.1
Predicted ATPase.
   
 0.862
SDS26182.1
Signal transduction histidine kinase.
  
0.858
SDS56560.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.858
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.