Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR83496.1 | SDT22967.1 | SAMN05444162_0157 | SAMN05444162_3486 | Prephenate dehydrogenase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.825 |
| SDR83496.1 | aroA | SAMN05444162_0157 | SAMN05444162_4200 | Prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.987 |
| SDR83496.1 | aroB | SAMN05444162_0157 | SAMN05444162_0166 | Prephenate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.875 |
| SDR83496.1 | aroC | SAMN05444162_0157 | SAMN05444162_0670 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.913 |
| SDR83496.1 | aroE | SAMN05444162_0157 | SAMN05444162_3882 | Prephenate dehydrogenase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.625 |
| SDR83496.1 | aroK | SAMN05444162_0157 | SAMN05444162_4199 | Prephenate dehydrogenase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.820 |
| SDR83496.1 | cmk | SAMN05444162_0157 | SAMN05444162_0199 | Prephenate dehydrogenase. | Cytidylate kinase. | 0.942 |
| SDR83496.1 | serC | SAMN05444162_0157 | SAMN05444162_3488 | Prephenate dehydrogenase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.483 |
| SDT22967.1 | SDR83496.1 | SAMN05444162_3486 | SAMN05444162_0157 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Prephenate dehydrogenase. | 0.825 |
| SDT22967.1 | aroA | SAMN05444162_3486 | SAMN05444162_4200 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.779 |
| SDT22967.1 | aroB | SAMN05444162_3486 | SAMN05444162_0166 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.992 |
| SDT22967.1 | aroC | SAMN05444162_3486 | SAMN05444162_0670 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.803 |
| SDT22967.1 | aroE | SAMN05444162_3486 | SAMN05444162_3882 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.672 |
| SDT22967.1 | aroK | SAMN05444162_3486 | SAMN05444162_4199 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.835 |
| SDT22967.1 | serC | SAMN05444162_3486 | SAMN05444162_3488 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.412 |
| SDT41871.1 | SDT50216.1 | SAMN05444162_4211 | SAMN05444162_4622 | acetyl-CoA synthetase. | Long-chain acyl-CoA synthetase. | 0.918 |
| SDT41871.1 | aroA | SAMN05444162_4211 | SAMN05444162_4200 | acetyl-CoA synthetase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.875 |
| SDT41871.1 | aroC | SAMN05444162_4211 | SAMN05444162_0670 | acetyl-CoA synthetase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.566 |
| SDT41871.1 | aroK | SAMN05444162_4211 | SAMN05444162_4199 | acetyl-CoA synthetase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.550 |
| SDT50216.1 | SDT41871.1 | SAMN05444162_4622 | SAMN05444162_4211 | Long-chain acyl-CoA synthetase. | acetyl-CoA synthetase. | 0.918 |
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