STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT43996.1iron(III) transport system substrate-binding protein. (375 aa)    
Predicted Functional Partners:
SDT44052.1
iron(III) transport system permease protein.
 
 
 0.997
SDT44075.1
iron(III) transport system ATP-binding protein.
 
 
 0.991
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.839
SDT47986.1
iron(III) transport system ATP-binding protein.
 
 
 0.653
SDS18484.1
Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
 
  
  0.585
SDT47968.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.555
SDT43930.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
    
  0.535
SDT38234.1
Sugar phosphate permease.
  
    0.521
SDT38277.1
Predicted arabinose efflux permease, MFS family.
  
    0.521
SDS40939.1
Spermidine/putrescine transport system permease protein.
    
  0.511
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.