STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT49348.1Putative membrane protein. (132 aa)    
Predicted Functional Partners:
SDT49320.1
Glutathionylspermidine synthase.
 
   0.926
SDT49305.1
Hypothetical protein.
       0.854
SDT49332.1
Hypothetical protein.
       0.854
SDT49288.1
Hypothetical protein.
       0.792
SDS52489.1
Transmembrane transcriptional regulator (anti-sigma factor RsiW).
  
     0.767
SDT41988.1
NfeD-like C-terminal, partner-binding.
  
     0.686
SDT49259.1
Peroxiredoxin, SACOL1771 subfamily.
 
     0.578
SDT49548.1
DinB superfamily protein.
  
     0.555
SDS06641.1
Protein of unknown function.
  
     0.520
SDS63287.1
Hypothetical protein.
  
     0.494
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.