STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT54653.1Amino acid transporter. (537 aa)    
Predicted Functional Partners:
SDT52930.1
GAF sensor hybrid histidine kinase.
  
 
 0.639
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
   
 0.611
SDT23904.1
Pullulanase, extracellular; Belongs to the glycosyl hydrolase 13 family.
   
 0.599
SDS20964.1
Alpha-glucosidase.
    
 0.591
SDS31182.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.591
SDS37619.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.591
SDS51615.1
Glycosidase.
    
 0.591
SDS90477.1
Alpha-amylase.
    
 0.591
SDT05525.1
Alpha-amylase.
    
 0.591
SDS36590.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.547
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.