STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT54800.1Glutamate synthase (NADPH/NADH) small chain. (495 aa)    
Predicted Functional Partners:
SDS30372.1
Glutamate synthase (ferredoxin).
 0.999
SDR84880.1
Ferredoxin, 2Fe-2S.
    
 0.958
SDT49671.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
 
 0.915
SDT47526.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.869
SDT54844.1
Dihydrolipoamide dehydrogenase.
   
 0.846
SDS36590.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.839
SDT55476.1
Glutamine synthetase.
  
 
 0.830
SDT22991.1
Glutamine synthetase.
  
 
 0.825
SDT50110.1
Electron transfer flavoprotein beta subunit.
   
 
 0.816
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
  
 
 0.814
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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