STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT55140.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (232 aa)    
Predicted Functional Partners:
SDT52930.1
GAF sensor hybrid histidine kinase.
  
0.977
SDT55122.1
Signal transduction histidine kinase.
  0.971
SDT43949.1
Two-component system, OmpR family, sensor histidine kinase ArlS.
 0.946
SDT22858.1
Signal transduction histidine kinase.
  0.893
SDT13954.1
PAS domain S-box-containing protein.
 0.879
SDT05000.1
Signal transduction histidine kinase.
  0.857
SDR99422.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.850
SDT56411.1
Predicted ATPase.
  
 0.839
SDT02054.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.836
SDT50388.1
Signal transduction histidine kinase.
 
  0.816
Your Current Organism:
Paenibacillaceae bacterium GAS479
NCBI taxonomy Id: 1882832
Other names: P. bacterium GAS479
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