STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI75939.1Uncharacterized conserved protein, DUF849 family. (244 aa)    
Predicted Functional Partners:
SDJ01119.1
Kynurenine formamidase.
  
    0.694
SDI75888.1
Hypothetical protein.
       0.675
SDI88683.1
3-oxoacid CoA-transferase subunit A.
    
 0.593
SDI88694.1
3-oxoacid CoA-transferase subunit B.
    
  0.570
SDI96454.1
acyl-CoA thioester hydrolase.
    
 0.555
SDJ44422.1
Protein of unknown function.
  
     0.527
SDJ03037.1
Threonine dehydrogenase.
    
  0.487
SDJ47702.1
Threonine dehydrogenase.
    
  0.487
SDI80308.1
P-aminobenzoate N-oxygenase AurF.
  
     0.406
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.