STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI78825.1Fe-S oxidoreductase. (751 aa)    
Predicted Functional Partners:
SDJ27419.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.839
SDJ51330.1
Glutamate synthase (NADH) large subunit.
    
 0.839
SDJ44683.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.818
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
  0.742
SDJ24921.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
   
 
  0.688
SDI80283.1
ferredoxin--NADP+ reductase.
  
 
  0.683
SDJ10287.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
 
 0.662
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.658
SDJ29944.1
(R)-ethylmalonyl-CoA mutase.
    
  0.636
SDJ49704.1
methylmalonyl-CoA mutase.
    
  0.636
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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