STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI80667.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
SDJ37166.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.665
SDJ37667.1
Ferredoxin-NADP reductase.
    
  0.665
SDI80690.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
       0.559
SDI77132.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 
 0.498
SDJ39948.1
Cupin domain-containing protein.
    
  0.462
SDJ48667.1
Transcriptional regulator, XRE family with cupin sensor.
 
  
  0.429
SDJ11479.1
Cupin domain-containing protein.
 
  
  0.413
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.