STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI84720.1Hypothetical protein. (896 aa)    
Predicted Functional Partners:
SDI91236.1
Hypothetical protein.
  
     0.485
SDJ23494.1
mxaD protein.
  
     0.454
SDI95502.1
Hypothetical protein.
  
     0.445
SDI84658.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
       0.439
SDI84679.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
       0.439
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.439
SDJ41317.1
Transcriptional regulator, HxlR family.
  
     0.432
SDI77132.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
   
 0.431
SDJ45387.1
Hypothetical protein.
  
     0.431
SDI93045.1
Conserved repeat domain-containing protein.
  
     0.424
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.