STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI88283.1Lactate 2-monooxygenase. (385 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.923
SDJ01809.1
FAD/FMN-containing dehydrogenase.
  
 0.914
SDJ26485.1
Glycolate oxidase.
 0.889
SDJ44683.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.874
SDJ47331.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
  
 
 0.823
SDJ36979.1
4-hydroxyphenylpyruvate dioxygenase.
 
 
 0.808
SDJ27396.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.806
SDJ51005.1
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate.
   
 
 0.788
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.785
SDJ28808.1
Acetolactate synthase, large subunit.
  
 
 0.772
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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