STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI92610.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (241 aa)    
Predicted Functional Partners:
SDI77132.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 
 0.811
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
      0.769
SDJ12243.1
[acyl-carrier-protein] S-malonyltransferase.
    
  0.670
SDJ24921.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.643
SDJ14021.1
L-threonine aldolase.
    
  0.607
SDJ41215.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.591
SDI92601.1
Hypothetical protein.
       0.574
SDI92651.1
Putative sensory transduction regulator.
       0.559
SDJ41127.1
Long-chain acyl-CoA synthetase.
 
 
 
  0.556
SDI76004.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.549
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.