STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI95029.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (326 aa)    
Predicted Functional Partners:
SDJ14168.1
Phytoene synthase.
  
 0.938
SDJ51449.1
Undecaprenyl-diphosphatase; Manually curated.
   
 0.931
SDJ39747.1
2-polyprenyl-6-methoxyphenol hydroxylase.
   
 0.806
SDI79549.1
Unspecific monooxygenase/cytochrome P450 / NADPH-cytochrome P450 reductase.
   
 0.700
SDI86620.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 0.673
SDJ37754.1
Cytochrome P450.
  
 0.656
SDJ37166.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.642
SDJ37667.1
Ferredoxin-NADP reductase.
   
 
 0.642
SDI84852.1
Fatty acid desaturase.
  
 
 0.555
SDJ37649.1
Fatty acid desaturase.
  
 
 0.555
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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