STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ01902.1CsbD-like; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
SDJ05013.1
PPOX class probable F420-dependent enzyme.
 
    0.553
SDI80240.1
Hypothetical protein.
   
    0.539
SDJ01847.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
       0.520
SDJ01866.1
Uncharacterized conserved protein, Alpha-E superfamily.
       0.520
SDJ01888.1
Transglutaminase-like enzyme, putative cysteine protease.
       0.520
SDI94055.1
ABC-2 type transport system ATP-binding protein.
  
    0.503
SDJ08779.1
General stress protein 26.
  
    0.484
SDJ22078.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.484
SDJ52226.1
PPOX class probable F420-dependent enzyme.
  
    0.484
SDJ12916.1
Hypothetical protein.
   
    0.449
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.