STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ03037.1Threonine dehydrogenase. (325 aa)    
Predicted Functional Partners:
SDJ03059.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.953
SDJ03073.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.947
SDJ03098.1
Uncharacterized membrane protein YbhN, UPF0104 family.
 
     0.932
SDJ03108.1
5-amino-6-(5-phosphoribosylamino)uracil reductase.
 
    0.907
SDJ03022.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.903
SDJ02994.1
Phosphoglycerol transferase MdoB.
 
     0.893
SDJ00800.1
8-amino-7-oxononanoate synthase.
  
 
 0.837
SDJ44683.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.808
SDJ10287.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
 
 0.805
SDI77132.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
 
 
 0.758
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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