STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ05156.1Transcriptional regulator, ArsR family. (112 aa)    
Predicted Functional Partners:
SDJ05130.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.864
SDJ01927.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.682
SDI87007.1
Transcriptional regulator, ArsR family.
  
    0.656
SDJ05165.1
Ribosomal protein S18 acetylase RimI; Non-canonical start codon; manually curated.
       0.598
SDJ05197.1
Serine protease, subtilisin family.
       0.598
SDJ05122.1
Catechol 2,3-dioxygenase.
       0.562
SDJ21912.1
Transcriptional regulator, ArsR family.
  
     0.481
SDJ05215.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.405
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.