Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ05742.1 | SDJ05758.1 | SAMN05444157_1509 | SAMN05444157_1510 | Protein of unknown function. | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | 0.524 |
SDJ05742.1 | SDJ21912.1 | SAMN05444157_1509 | SAMN05444157_2326 | Protein of unknown function. | Transcriptional regulator, ArsR family. | 0.439 |
SDJ05742.1 | gcvP | SAMN05444157_1509 | SAMN05444157_2403 | Protein of unknown function. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.474 |
SDJ05758.1 | SDJ05742.1 | SAMN05444157_1510 | SAMN05444157_1509 | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | Protein of unknown function. | 0.524 |
SDJ21912.1 | SDJ05742.1 | SAMN05444157_2326 | SAMN05444157_1509 | Transcriptional regulator, ArsR family. | Protein of unknown function. | 0.439 |
gcvP | SDJ05742.1 | SAMN05444157_2403 | SAMN05444157_1509 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Protein of unknown function. | 0.474 |