STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ08138.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
SDJ13380.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
   
 0.885
SDJ08161.1
GDSL-like Lipase/Acylhydrolase family protein.
       0.768
SDJ08177.1
Glycosyl hydrolases family 16.
       0.768
SDJ13261.1
Cytochrome c oxidase subunit 2.
   
 0.743
SDJ08199.1
Hypothetical protein.
       0.722
SDJ08220.1
Hypothetical protein.
       0.702
SDJ13150.1
Thiosulfate dehydrogenase [quinone] large subunit.
    
  0.622
SDJ08061.1
Hypothetical protein.
       0.574
SDJ08083.1
Hypothetical protein.
       0.574
SDJ08102.1
Hypothetical protein.
       0.574
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.