STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ19290.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
SDJ14476.1
Protein of unknown function.
  
     0.652
SDJ19253.1
Superfamily II DNA or RNA helicase.
  
     0.571
SDJ19269.1
Hypothetical protein.
       0.550
SDJ12120.1
Protein of unknown function.
  
     0.540
SDJ17552.1
RIP metalloprotease RseP.
  
     0.523
SDJ19384.1
Protein of unknown function.
  
     0.486
SDJ19459.1
Protein of unknown function.
  
     0.457
SDJ21219.1
Hypothetical protein.
  
     0.446
SDJ12798.1
RDD family protein.
  
     0.420
SDJ19686.1
Protein of unknown function.
  
     0.419
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.