STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ26171.1Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. (365 aa)    
Predicted Functional Partners:
SDJ08365.1
Xylellain. Cysteine peptidase. MEROPS family C01A.
  
     0.697
SDI82850.1
Ca-activated chloride channel family protein.
  
     0.682
SDJ10358.1
Glucan 1,4-alpha-glucosidase.
  
     0.665
SDJ21064.1
Nitrogen fixation protein NifU.
    
   0.662
SDJ39048.1
Phosphoserine phosphatase.
    
 0.656
SDJ51449.1
Undecaprenyl-diphosphatase; Manually curated.
  
 0.648
SDJ00298.1
Cystathionine beta-synthase.
    
  0.639
SDI75681.1
Mechanosensitive ion channel.
 
     0.586
SDJ50926.1
Trk K+ transport system, NAD-binding component.
  
  
 0.542
SDJ26149.1
Hypothetical protein.
       0.523
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.