STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ27912.1long-chain-acyl-CoA dehydrogenase. (383 aa)    
Predicted Functional Partners:
SDJ27888.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.974
SDJ29178.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
  0.929
SDI77132.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.925
SDJ27871.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.923
SDJ29191.1
Electron transfer flavoprotein beta subunit.
 
  0.838
SDJ27934.1
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
 
  0.786
SDJ15677.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
 
  0.713
SDJ39249.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 
  0.702
SDJ29944.1
(R)-ethylmalonyl-CoA mutase.
  
 
 0.673
SDJ13612.1
Long-chain acyl-CoA synthetase.
   
  0.659
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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