STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ29217.1Sugar lactone lactonase YvrE. (335 aa)    
Predicted Functional Partners:
SDI86838.1
Gluconokinase/shikimate kinase.
    
 0.586
SDJ47890.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
  0.505
SDJ28913.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
 0.502
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.496
SDJ37711.1
Transcriptional regulator, TetR family.
  
     0.488
SDJ29191.1
Electron transfer flavoprotein beta subunit.
       0.484
SDJ51572.1
Putative MFS transporter, AGZA family, xanthine/uracil permease.
     
 0.482
SDJ48383.1
Glycosyl hydrolase family 79, N-terminal domain.
  
     0.480
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
   
  0.478
SDJ47634.1
Protease I.
   
 
  0.472
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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